Subtract one or more blacklist lists from a reference panel
Usage
niptmer_ref_subtract_blacklists(
ref_panel,
blacklist_lists,
out_dir,
suffix = "_popflt"
)
Arguments
- ref_panel
A niptmer_ref_panel object.
- blacklist_lists
Character vector of blacklist list paths.
- out_dir
Output directory for filtered chromosome lists.
- suffix
Suffix appended to chromosome id for output prefixes.
Value
A niptmer_ref_panel object.